Scottnema lindsayae mitochondrial Cytochrome c oxidase I (COI) sequences

List of each individual Scottnema lindsayae sanger sequenced for a portion of the mitochondrial DNA COX1 gene and the corresponding aligned and trimmed sequences.

File: 

mcmlter-soils-jackson-soils_scott_coiseq-20230411.csv (242.12 KB)

...or query the dataset by variables and dates of interest:

Variables
dataset_code
  • Label: Dataset Code
  • Definition: Internal dataset code.
  • Type: Nominal
  • Missing values: None specified
sequence_id
  • Label: Sequence ID
  • Definition: Individual Scottnema lindsayae sequence identifier.
  • Type: Nominal
  • Missing values: None specified
site
  • Label: Site Name
  • Definition: Name of the location where soils were sampled.
  • Type: Nominal
  • Missing values: None specified
species
  • Label: Species
  • Definition: Species identity.
  • Type: Nominal
  • Missing values: None specified
seq_coi
  • Label: Sequence
  • Definition: Assembled sequences from a portion of the mitochondrial COX1 gene.
  • Type: Nominal
  • Missing values: None specified
ncbi_accn
  • Label: NCBI Accession Number
  • Definition: NCBI nucleotide accession number corresponding with each sequence. https://www.ncbi.nlm.nih.gov/nuccore/?term=OP456699:OP456947[accn]
  • Type: Nominal
  • Missing values: None specified
Data Source Details

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Field delimiter: 

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