03255nas a2200277 4500008004100000022001300041245011100054210006900165260001200234300001100246520240400257653001502661653001302676653001102689653002902700653000902729653001702738100002102755700002402776700002002800700002102820700002502841700001702866700002202883856007202905 2024 eng d a2666017200aRemotely characterizing photosynthetic biocrust in snowpack-fed microhabitats of Taylor Valley, Antarctica0 aRemotely characterizing photosynthetic biocrust in snowpackfed m c02/2024 a1001203 a
Microbial communities are the primary drivers of carbon cycling in the McMurdo Dry Valleys of Antarctica. Dense microbial mats, consisting mainly of photosynthetic cyanobacteria, occupy aquatic areas associated with streams and lakes. Other microbial communities also occur at lower densities as patchy surface biological soil crusts (hereafter, biocrusts) across the terrestrial landscape. Multispectral satellite data have been used to model microbial mat abundance in high-density areas like stream and lake margins, but no previous studies have investigated the lower detection limits of biocrusts. Here, we describe remote sensing and field-based survey and sampling approaches to study the detectability and distribution of biocrusts in the McMurdo Dry Valleys. Using a combination of multi- and hyperspectral tools and spectral linear unmixing, we modeled the abundances of biocrust in eastern Taylor Valley. Our spectral approaches can detect low masses of biocrust material in laboratory microcosms down to biocrust concentrations of 1% by mass. These techniques also distinguish the spectra of biocrust from both surface rock and mineral signatures from orbit. We found that biocrusts are present throughout the soils of eastern Taylor Valley and are associated with diverse underlying soil communities. The densest biocrust communities identified in this study had total organic carbon 5x greater than the content of typical arid soils. The most productive biocrusts were located downslope of melting snowpacks in unique soil ecosystems that are distinct from the surrounding arid landscape. There are similarities between the snowpack and stream sediment communities (high diversity of soil invertebrates) as well as their ecosystem properties (e.g., persistence of liquid water, high transfer of available nutrients, lower salinity from flushing) compared to the typical arid terrestrial ecosystem of the dry valleys. Our approach extends the capability of orbital remote sensing of photosynthetic communities out of the aquatic margins and into the drier soils which comprise most of this landscape. This interdisciplinary work is critical for measuring and monitoring terrestrial carbon stocks and predicting future ecosystem dynamics in this currently water-limited but increasingly dynamic Antarctic landscape, which is particularly climate-sensitive and difficult to access.
10aAntarctica10abiocrust10acarbon10areflectance spectroscopy10asnow10asoil ecology1 aPower, Sarah, N.1 aSalvatore, Mark, R.1 aSokol, Eric, R.1 aStanish, Lee, F.1 aBorges, Schuyler, R.1 aAdams, Byron1 aBarrett, John, E. uhttps://www.sciencedirect.com/science/article/pii/S266601722400004X02499nas a2200277 4500008004100000245009500041210006900136260001200205300000800217490000700225520169100232653001001923653002701933653001801960653002501978653001502003100002302018700002202041700001802063700002202081700001902103700001702122700002002139700001802159856004402177 2023 eng d00aBiogeography and genetic diversity of terrestrial mites in the Ross Sea region, Antarctica0 aBiogeography and genetic diversity of terrestrial mites in the R c03/2023 a6060 v143 aFree-living terrestrial mites (Acari) have persisted through numerous glacial cycles in Antarctica. Very little is known, however, of their genetic diversity and distribution, particularly within the Ross Sea region. To redress this gap, we sampled mites throughout the Ross Sea region, East Antarctica, including Victoria Land and the Queen Maud Mountains (QMM), covering a latitudinal range of 72–85 °S, as well as Lauft Island near Mt. Siple (73 °S) in West Antarctica and Macquarie Island (54 °S) in the sub-Antarctic. We assessed genetic diversity using mitochondrial cytochrome c oxidase subunit I gene sequences (COI-5P DNA barcode region), and also morphologically identified voucher specimens. We obtained 130 sequences representing four genera: Nanorchestes (n = 30 sequences), Stereotydeus (n = 46), Coccorhagidia (n = 18) and Eupodes (n = 36). Tree-based analyses (maximum likelihood) revealed 13 genetic clusters, representing as many as 23 putative species indicated by barcode index numbers (BINs) from the Barcode of Life Datasystems (BOLD) database. We found evidence for geographically-isolated cryptic species, e.g., within Stereotydeus belli and S. punctatus, as well as unique genetic groups occurring in sympatry (e.g., Nanorchestes spp. in QMM). Collectively, these data confirm high genetic divergence as a consequence of geographic isolation over evolutionary timescales. From a conservation perspective, additional targeted sampling of understudied areas in the Ross Sea region should be prioritised, as further diversity is likely to be found in these short-range endemic mites.
10aAcari10aAntarctic conservation10aDNA barcoding10ageographic isolation10aspeciation1 aCollins, Gemma, E.1 aYoung, Monica, R.1 aConvey, Peter1 aChown, Steven, L.1 aCary, Craig, S1 aAdams, Byron1 aWall, Diana, H.1 aHogg, Ian, D. uhttps://www.mdpi.com/2073-4425/14/3/60602076nas a2200313 4500008004100000245008700041210006900128260001200197300001100209490000800220520114900228653002801377653002701405653002401432653002401456653001301480653000901493100001301502700002501515700001601540700002201556700001701578700001801595700001601613700002401629700002001653700001701673856007201690 2023 eng d00aEcological stoichiometry drives the evolution of soil nematode life history traits0 aEcological stoichiometry drives the evolution of soil nematode l c02/2023 a1088910 v1773 aEcological stoichiometry is a useful theoretical framework for understanding the sources and controls on nutrient availability that structure the composition and diversity of biotic communities. One such relationship is that organismal development rate is positively linked to cellular Phosphorus (P). We hypothesized that P availability, relative to other nutrients, e.g., nitrogen and carbon, would drive the evolution of traits associated with organismal growth and development. We examined the effects of P availability both in situ and in vitro, on free-living soil nematodes. We found that P-deficient environments produce predictable changes in the ecology and evolution of important life history traits. Our results identify altered rRNA gene copy number and subsequent changes in gene expression and protein synthesis as mechanisms by which P-deficiency influences these traits. These findings have important implications for explaining soil ecological and evolutionary patterns across multiple levels of organization, including the structure and functioning of organisms, populations, communities, and ecosystems.
10aelemental stoichiometry10agrowth rate hypothesis10alife history theory10amolecular evolution10anematoda10arRNA1 aXue, Xia1 aAdhikari, Bishwo, N.1 aBall, Becky1 aBarrett, John, E.1 aMiao, Jinxin1 aPerkes, Ammon1 aMartin, Mac1 aSimmons, Breana, L.1 aWall, Diana, H.1 aAdams, Byron uhttps://www.sciencedirect.com/science/article/pii/S003807172200348002136nas a2200205 4500008004100000245007300041210007100114260001200185520148400197653001901681653001901700653002301719653001701742653002601759653002301785653002001808100002701828700001701855856005801872 2022 eng d00aCommunity assembly in the wake of glacial retreat: A meta‐analysis0 aCommunity assembly in the wake of glacial retreat A meta‐analysi c09/20223 aAntarctic biodiversity faces an unknown future with a changing climate. Most terrestrial biota is restricted to limited patches of ice-free land in a sea of ice, where they are adapted to the continent's extreme cold and wind and exploit microhabitats of suitable conditions. As temperatures rise, ice-free areas are predicted to expand, more rapidly in some areas than others. There is high uncertainty as to how species' distributions, physiology, abundance, and survivorship will be affected as their habitats transform. Here we use current knowledge to propose hypotheses that ice-free area expansion (i) will increase habitat availability, though the quality of habitat will vary; (ii) will increase structural connectivity, although not necessarily increase opportunities for species establishment; (iii) combined with milder climates will increase likelihood of non-native species establishment, but may also lengthen activity windows for all species; and (iv) will benefit some species and not others, possibly resulting in increased homogeneity of biodiversity. We anticipate considerable spatial, temporal, and taxonomic variation in species responses, and a heightened need for interdisciplinary research to understand the factors associated with ecosystem resilience under future scenarios. Such research will help identify at-risk species or vulnerable localities and is crucial for informing environmental management and policymaking into the future.
10achronosequence10aclimate change10acommunity assembly10adeglaciation10aecological succession10aglacial forefields10asoil ecosystems1 aPothula, Satyendra, K.1 aAdams, Byron uhttps://onlinelibrary.wiley.com/doi/10.1111/gcb.1642702367nas a2200289 4500008004100000245011400041210006900155260001200224300001400236490000600250520147700256653001501733653002201748653002201770653001001792100002601802700002401828700002701852700002101879700001801900700001701918700002001935700001701955700001701972700002401989856006402013 2022 eng d00aElevational constraints on the composition and genomic attributes of microbial communities in Antarctic soils0 aElevational constraints on the composition and genomic attribute c01/2022 ae01330-210 v73 aThe inland soils found on the Antarctic continent represent one of the more challenging environments for microbial life on Earth. Nevertheless, Antarctic soils harbor unique bacterial and archaeal (prokaryotic) communities able to cope with extremely cold and dry conditions. These communities are not homogeneous, and the taxonomic composition and functional capabilities (genomic attributes) of these communities across environmental gradients remain largely undetermined. We analyzed the prokaryotic communities in soil samples collected from across the Shackleton Glacier region of Antarctica by coupling quantitative PCR, marker gene amplicon sequencing, and shotgun metagenomic sequencing. We found that elevation was the dominant factor explaining differences in the structures of the soil prokaryotic communities, with the drier and saltier soils found at higher elevations harboring less diverse communities and unique assemblages of cooccurring taxa. The higher-elevation soil communities also had lower maximum potential growth rates (as inferred from metagenome-based estimates of codon usage bias) and an overrepresentation of genes associated with trace gas metabolism. Together, these results highlight the utility of assessing community shifts across pronounced environmental gradients to improve our understanding of the microbial diversity found in Antarctic soils and the strategies used by soil microbes to persist at the limits of habitability.
10aAntarctica10amicrobial ecology10asoil microbiology10asoils1 aDragone, Nicholas, B.1 aHenley, Jessica, B.1 aHolland-Moritz, Hannah1 aDiaz, Melisa, A.1 aHogg, Ian, D.1 aLyons, Berry1 aWall, Diana, H.1 aAdams, Byron1 aFierer, Noah1 aMackelprang, Rachel uhttps://journals.asm.org/doi/full/10.1128/msystems.01330-2102944nas a2200301 4500008004100000022001400041245009600055210007100151260001200222490000700234520204100241653001702282653001902299653002002318653001402338653002302352653002302375100002602398700001702424700002102441700002402462700002602486700001702512700001702529700001802546700002002564856005802584 2022 eng d a1354-101300aResponse of Antarctic soil fauna to climate‐driven changes since the Last Glacial Maximum0 aResponse of Antarctic soil fauna to climate‐driven changes since c01/20220 v283 aUnderstanding how terrestrial biotic communities have responded to glacial recession since the Last Glacial Maximum (LGM) can inform present and future responses of biota to climate change. In Antarctica, the Transantarctic Mountains (TAM) have experienced massive environmental changes associated with glacial retreat since the LGM, yet we have few clues as to how its soil invertebrate-dominated animal communities have responded. Here, we surveyed soil invertebrate fauna from above and below proposed LGM elevations along transects located at 12 features across the Shackleton Glacier region. Our transects captured gradients of surface ages possibly up to 4.5 million years and the soils have been free from human disturbance for their entire history. Our data support the hypothesis that soils exposed during the LGM are now less suitable habitats for invertebrates than those that have been exposed by deglaciation following the LGM. Our results show that faunal abundance, community composition, and diversity were all strongly affected by climate-driven changes since the LGM. Soils more recently exposed by glacial recession (as indicated by distances from present ice surfaces) had higher faunal abundances and species richness than older exposed soils. Higher abundances of the dominant nematode Scottnema were found in older exposed soils, while Eudorylaimus, Plectus, tardigrades, and rotifers preferentially occurred in more recently exposed soils. Approximately 30% of the soils from which invertebrates could be extracted had only Scottnema, and these single-taxon communities occurred more frequently in soils exposed for longer periods of time. Our structural equation modeling of abiotic drivers highlighted soil salinity as a key mediator of Scottnema responses to soil exposure age. These changes in soil habitat suitability and biotic communities since the LGM indicate that Antarctic terrestrial biodiversity throughout the TAM will be highly altered by climate warming.
10abiodiversity10aclimate change10aglacial retreat10anematodes10aShackleton Glacier10asoil invertebrates1 aFranco, André, L. C.1 aAdams, Byron1 aDiaz, Melisa, A.1 aLemoine, Nathan, P.1 aDragone, Nicholas, B.1 aFierer, Noah1 aLyons, Berry1 aHogg, Ian, D.1 aWall, Diana, H. uhttps://onlinelibrary.wiley.com/doi/10.1111/gcb.1594002575nas a2200397 4500008004100000022001400041245006100055210005700116260001200173490000800185520139000193100002701583700002801610700001701638700002401655700003001679700001901709700002201728700002101750700002301771700002201794700002501816700002001841700002201861700002101883700002201904700003101926700002201957700002301979700002202002700002402024700002102048700002202069700003302091856005302124 2022 eng d a0027-842400aThe time is right for an Antarctic biorepository network0 atime is right for an Antarctic biorepository network c12/20220 v1193 aAntarctica is a central driver of the Earth’s climate and health. The Southern Ocean surrounding Antarctica serves as a major sink for anthropogenic CO2 and heat, and the loss of Antarctic ice sheets contributes significantly to sea level rise and will continue to do so as the loss of ice sheets accelerates, with sufficient water stores to raise sea levels by 58 m. Antarctica's marine environment is home to a number of iconic species, and the terrestrial realm harbors a remarkable oasis for life, much of which has yet to be discovered. Distinctive oceanographic features of the Southern Ocean—including the Antarctic Circumpolar Current, the Antarctic Polar Front, and exceptional depths surrounding the continent—coupled with chronically cold temperatures have fostered the evolution of a vast number of uniquely coldadapted species, many of which are found nowhere else on the Earth. The Antarctic marine biota, for example, displays the highest level of species endemism on the Earth. However, warming, ocean acidification, pollution, and commercial exploitation threaten the integrity of Antarctic ecosystems. Understanding changes in the biota and its capacities for adaptation is imperative for establishing effective policies for mitigating the impacts of climate change and sustaining the Antarctic ecosystems that are vital to global health.
1 aO’Brien, Kristin, M.1 aCrockett, Elizabeth, L.1 aAdams, Byron1 aAmsler, Charles, D.1 aAppiah-Madson, Hannah, J.1 aCollins, Allen1 aDesvignes, Thomas1 aDetrich, William1 aDistel, Daniel, L.1 aEppley, Sarah, M.1 aFrable, Benjamin, W.1 aFranz, Nico, M.1 aGrim, Jeffrey, M.1 aKocot, Kevin, M.1 aMahon, Andrew, R.1 aMayfield-Meyer, Teresa, J.1 aMikucki, Jill, A.1 aMoser, William, E.1 aSchmull, Michaela1 aSeid, Charlotte, A.1 aSmith, Craig, R.1 aTodgham, Anne, E.1 aWatkins-Colwell, Gregory, J. uhttps://www.pnas.org/doi/10.1073/pnas.221280011902600nas a2200217 4500008004100000245010600041210006900147260001200216490000700228520191500235653001502150653001802165653001602183653002202199653001702221100002202238700001702260700002102277700001702298856006702315 2021 eng d00aAntarctic water tracks: Microbial community responses to variation in soil moisture, pH, and salinity0 aAntarctic water tracks Microbial community responses to variatio c01/20210 v123 aIce-free soils in the McMurdo Dry Valleys select for taxa able to cope with challenging environmental conditions, including extreme chemical water activity gradients, freeze-thaw cycling, desiccation, and solar radiation regimes. The low biotic complexity of Dry Valley soils makes them well suited to investigate environmental and spatial influences on bacterial community structure. Water tracks are annually wetted habitats in the cold-arid soils of Antarctica that form briefly each summer with moisture sourced from snow melt, ground ice thaw, and atmospheric deposition via deliquescence and vapor flow into brines. Compared to neighboring arid soils, water tracks are highly saline and relatively moist habitats. They represent a considerable area (∼5–10 km2) of the Dry Valley terrestrial ecosystem, an area that is expected to increase with ongoing climate change. The goal of this study was to determine how variation in the environmental conditions of water tracks influences the composition and diversity of microbial communities. We found significant differences in microbial community composition between on- and off-water track samples, and across two distinct locations. Of the tested environmental variables, soil salinity was the best predictor of community composition, with members of the Bacteroidetes phylum being relatively more abundant at higher salinities and the Actinobacteria phylum showing the opposite pattern. There was also a significant, inverse relationship between salinity and bacterial diversity. Our results suggest water track formation significantly alters dry soil microbial communities, likely influencing subsequent ecosystem functioning. We highlight how Dry Valley water tracks could be a useful model system for understanding the potential habitability of transiently wetted environments found on the surface of Mars.
10aAntarctica10aextremophiles10aMars analog10amicrobial ecology10awater tracks1 aGeorge, Scott, F.1 aFierer, Noah1 aLevy, Joseph, S.1 aAdams, Byron uhttps://www.frontiersin.org/articles/10.3389/fmicb.2021.61673004166nas a2200565 4500008004100000022001400041245007900055210006900134260001200203300001100215490000700226520245300233653001802686653002702704653001902731653001902750653001202769653001202781653001502793653008902808653002002897100002302917700002502940700002602965700002702991700002103018700002503039700001703064700002203081700002903103700002603132700002403158700002603182700002403208700002103232700001603253700002703269700002403296700002303320700002203343700002403365700002303389700001503412700002203427700002103449700002203470700002603492700002403518856005803542 2021 eng d a2150-892500aConnectivity: Insights from the U.S. Long Term Ecological Research Network0 aConnectivity Insights from the US Long Term Ecological Research c05/2021 ae034320 v123 aEcosystems across the United States are changing in complex and surprising ways. Ongoing demand for critical ecosystem services requires an understanding of the populations and communities in these ecosystems in the future. This paper represents a synthesis effort of the U.S. National Science Foundation-funded Long-Term Ecological Research (LTER) network addressing the core research area of “populations and communities.” The objective of this effort was to show the importance of long-term data collection and experiments for addressing the hardest questions in scientific ecology that have significant implications for environmental policy and management. Each LTER site developed at least one compelling case study about what their site could look like in 50–100 yr as human and environmental drivers influencing specific ecosystems change. As the case studies were prepared, five themes emerged, and the studies were grouped into papers in this LTER Futures Special Feature addressing state change, connectivity, resilience, time lags, and cascading effects. This paper addresses the “connectivity” theme and has examples from the Phoenix (urban), Niwot Ridge (alpine tundra), McMurdo Dry Valleys (polar desert), Plum Island (coastal), Santa Barbara Coastal (coastal), and Jornada (arid grassland and shrubland) sites. Connectivity has multiple dimensions, ranging from multi-scalar interactions in space to complex interactions over time that govern the transport of materials and the distribution and movement of organisms. The case studies presented here range widely, showing how land-use legacies interact with climate to alter the structure and function of arid ecosystems and flows of resources and organisms in Antarctic polar desert, alpine, urban, and coastal marine ecosystems. Long-term ecological research demonstrates that connectivity can, in some circumstances, sustain valuable ecosystem functions, such as the persistence of foundation species and their associated biodiversity or, it can be an agent of state change, as when it increases wind and water erosion. Increased connectivity due to warming can also lead to species range expansions or contractions and the introduction of undesirable species. Continued long-term studies are essential for addressing the complexities of connectivity. The diversity of ecosystems within the LTER network is a strong platform for these studies.
10aalpine tundra10aAntarctic polar desert10aarid grassland10aarid shrubland10acoastal10aestuary10asalt marsh10aSpecial Feature: Forecasting Earth’s Ecosystems with Long-Term Ecological Research10aurban ecosystem1 aIwaniec, David, M.1 aGooseff, Michael, N.1 aSuding, Katharine, N.1 aJohnson, David, Samuel1 aReed, Daniel, C.1 aPeters, Debra, P. C.1 aAdams, Byron1 aBarrett, John, E.1 aBestelmeyer, Brandon, T.1 aCastorani, Max, C. N.1 aCook, Elizabeth, M.1 aDavidson, Melissa, J.1 aGroffman, Peter, M.1 aHanan, Niall, P.1 aHuenneke, L1 aJohnson, Pieter, T. J.1 aMcKnight, Diane, M.1 aMiller, Robert, J.1 aOkin, Gregory, S.1 aPreston, Daniel, L.1 aRassweiler, Andrew1 aRay, Chris1 aSala, Osvaldo, E.1 aSchooley, Robert1 aSeastedt, Timothy1 aSpasojevic, Marko, J.1 aVivoni, Enrique, R. uhttps://onlinelibrary.wiley.com/doi/10.1002/ecs2.343202256nas a2200217 4500008004100000245008600041210006900127260001200196520154900208653001401757653002401771653002001795653001701815653002001832100001301852700001901865700002201884700002201906700001701928856009301945 2021 eng d00aGenome analysis of Plectus murrayi, a nematode from continental Antarctica0 aGenome analysis of IPlectus murrayiI a nematode from continental c01/20213 aPlectus murrayi is one of the most common and locally abundant invertebrates of continental Antarctic ecosystems. Because it is readily cultured on artificial medium in the laboratory and highly tolerant to an extremely harsh environment, Plectus murrayi is emerging as a model organism for understanding the evolutionary origin and maintenance of adaptive responses to multiple environmental stressors, including freezing and desiccation. The de novo assembled genome of Plectus murrayi contains 225.741 million base pairs and a total of 14,689 predicted genes. Compared to Caenorhabditis elegans, the architectural components of Plectus murrayi are characterized by a lower number of protein-coding genes, fewer transposable elements, but more exons, than closely related taxa from less harsh environments. We compared the transcriptomes of lab-reared Plectus murrayi with wild-caught Plectus murrayi and found genes involved in growth and cellular processing were up-regulated in lab-cultured Plectus murrayi, while a few genes associated with cellular metabolism and freeze tolerance were expressed at relatively lower levels. Preliminary comparative genomic and transcriptomic analyses suggest that the observed constraints on P. murrayi genome architecture and functional gene expression, including genome decay and intron retention, may be an adaptive response to persisting in a biotically simplified, yet consistently physically harsh environment.
10agene loss10agenome architecture10agenome assembly10agenome decay10aPlectus murrayi1 aXue, Xia1 aSuvorov, Anton1 aFujimoto, Stanley1 aDilman, Adler, R.1 aAdams, Byron uhttps://academic.oup.com/g3journal/advance-article/doi/10.1093/g3journal/jkaa045/604418902303nas a2200265 4500008004100000245012500041210006900166260001200235520144100247653001901688653002001707653002001727653001901747653002901766100002301795700001801818700001801836700002501854700001901879700001701898700001701915700002001932700002401952856006101976 2020 eng d00aGenetic diversity of soil invertebrates corroborates timing estimates for past collapses of the West Antarctic Ice Sheet0 aGenetic diversity of soil invertebrates corroborates timing esti c08/20203 aDuring austral summer field seasons between 1999 and 2018, we sampled at 91 locations throughout southern Victoria Land and along the Transantarctic Mountains for six species of endemic microarthropods (Collembola), covering a latitudinal range from 76.0°S to 87.3°S. We assembled individual mitochondrial cyto-chrome c oxidase subunit 1 (COI) sequences (n = 866) and found high levels of sequence divergence at both small (<10 km) and large (>600 km) spatial scales for four of the six Collembola species. We applied molecular clock estimates and assessed genetic divergences relative to the timing of past glacial cycles, including collapses of the West Antarctic Ice Sheet (WAIS). We found that genetically distinct lineages within three species have likely been isolated for at least 5.54 My to 3.52 My, while the other three species diverged more recently (<2 My). We suggest that Collembola had greater dispersal opportunities under past warmer climates, via flotation along coastal margins. Similarly increased opportunities for dispersal may occur under contemporary climate warming scenarios, which could influence the genetic structure of extant populations. As Collembola are a living record of past landscape evolution within Antarctica, these findings provide biological evidence to support geological and glaciological estimates of historical WAIS dynamics over the last ca. 5 My.
10aclimate change10amicroarthropods10amolecular clock10aphylogeography10aterrestrial biodiversity1 aCollins, Gemma, E.1 aHogg, Ian, D.1 aConvey, Peter1 aSancho, Leopoldo, G.1 aCowan, Don, A.1 aLyons, Berry1 aAdams, Byron1 aWall, Diana, H.1 aGreen, T., G. Allan uhttps://www.pnas.org/content/early/2020/08/19/200792511702540nas a2200289 4500008004100000245012600041210006900167260001200236490000800248520163000256653002101886653001501907653001701922653001501939653002401954653001901978100002101997700002102018700001902039700002402058700001902082700001702101700002402118700001902142700001702161856007202178 2020 eng d00aGeochemistry of aeolian material from the McMurdo Dry Valleys, Antarctica: Insights into Southern Hemisphere dust sources0 aGeochemistry of aeolian material from the McMurdo Dry Valleys An c10/20200 v5473 aIn the Southern Hemisphere, the major sources of dust and other aeolian materials are from Patagonia, South Africa, Australia, and New Zealand. Dust from Patagonia and New Zealand has been identified in ice cores throughout Antarctica, suggesting that during arid and windy periods, such as glacial periods, dust can be entrained and transported onto the continent. However, little information exists on modern Antarctic dust sources, transport, and its role in the Southern Hemisphere dust cycle. We present the first geochemical characterization of aeolian materials collected at five heights (between 5 cm and 100 cm) above the surface in four valleys within the McMurdo Dry Valleys, the largest ice-free area in Antarctica. Our mineralogy data indicate that these materials are primarily derived from local rocks of the McMurdo Volcanics, Ferrar Dolerite, Beacon Sandstone and Granite Harbor Intrusives, with varying contributions of each rock type dependent on the valley location. While major oxide, trace element and rare earth element data show that low elevation and coastal locations (with respect to the Ross Sea) are dominated by local sources, high elevation and inland locations have accumulated both local materials and dust from other distant Southern Hemisphere sources. This far-traveled material may not be accumulating today, but represents a paleo source that is resuspended from the soils. By geochemically “fingerprinting” aeolian materials from the MDV, we can better inform future studies on the transport of materials within Antarctica and between Southern Hemisphere land masses.
10aaeolian material10aAntarctica10amajor oxides10amineralogy10arare earth elements10atrace elements1 aDiaz, Melisa, A.1 aWelch, Susan, A.1 aSheets, J., M.1 aWelch, Kathleen, A.1 aKhan, Alia, L.1 aAdams, Byron1 aMcKnight, Diane, M.1 aCary, Craig, S1 aLyons, Berry uhttps://www.sciencedirect.com/science/article/pii/S0012821X2030404003683nas a2200997 4500008004100000245008200041210006900123260001200192490000600204520084100210100002601051700001901077700002001096700001401116700002501130700002501155700001701180700001701197700001901214700002601233700002301259700002701282700002301309700002101332700003101353700001801384700002101402700002001423700003001443700001501473700002001488700001901508700002501527700002301552700001901575700002101594700001701615700002201632700002101654700002601675700002301701700001101724700001701735700002201752700002101774700003101795700002401826700002201850700001501872700002201887700001801909700001701927700002501944700002201969700001901991700002702010700001602037700001802053700002202071700003202093700002302125700002302148700002002171700002202191700002002213700002702233700001802260700002102278700001902299700002302318700001502341700002302356700002202379700002402401700002102425700002302446700002102469700001802490700001802508700001902526700001402545700002802559700001702587700002702604856005402631 2020 eng d00aA global database of soil nematode abundance and functional group composition0 aglobal database of soil nematode abundance and functional group c03/20200 v73 aAs the most abundant animals on earth, nematodes are a dominant component of the soil community. they play critical roles in regulating biogeochemical cycles and vegetation dynamics within and across landscapes and are an indicator of soil biological activity. Here, we present a comprehensive global dataset of soil nematode abundance and functional group composition. This dataset includes 6,825 georeferenced soil samples from all continents and biomes. For geospatial mapping purposes these samples are aggregated into 1,933 unique 1-km pixels, each of which is linked to 73 global environmental covariate data layers. Altogether, this dataset can help to gain insight into the spatial distribution patterns of soil nematode abundance and community composition, and the environmental drivers shaping these patterns.
1 avan den Hoogen, Johan1 aGeisen, Stefan1 aWall, Diana, H.1 aWardle, D1 aTraunspurger, Walter1 ade Goede, Ron, G. M.1 aAdams, Byron1 aAhmad, Wasim1 aFerris, Howard1 aBardgett, Richard, D.1 aBonkowski, Michael1 aCampos-Herrera, Raquel1 aCares, Juvenil, E.1 aCaruso, Tancredi1 aCaixeta, Larissa, de Brito1 aChen, Xiaoyun1 aCosta, Sofia, R.1 aCreamer, Rachel1 aCastro, José, da Cunha e1 aDam, Marie1 aDjigal, Djibril1 aEscuer, Miguel1 aGriffiths, Bryan, S.1 aGutiérrez, Carmen1 aHohberg, Karin1 aKalinkina, Daria1 aKardol, Paul1 aKergunteuil, Alan1 aKorthals, Gerard1 aKrashevska, Valentyna1 aKudrin, Alexey, A.1 aLi, Qi1 aLiang, Wenju1 aMagilton, Matthew1 aMarais, Mariette1 aMartín, José, Antonio Ro1 aMatveeva, Elizaveta1 aMayad, El, Hassan1 aMzough, E.1 aMulder, Christian1 aMullin, Peter1 aNeilson, Roy1 aNguyen, T., A. Duong1 aNielsen, Uffe, N.1 aOkada, Hiroaki1 aRius, Juan, Emilio Pal1 aPan, Kaiwen1 aPeneva, Vlada1 aPellissier, Loïc1 ada Silva, Julio, Carlos Per1 aPitteloud, Camille1 aPowers, Thomas, O.1 aPowers, Kirsten1 aQuist, Casper, W.1 aRasmann, Sergio1 aMoreno, Sara, Sánchez1 aScheu, Stefan1 aSetälä, Heikki1 aSushchuk, Anna1 aTiunov, Alexei, V.1 aTrap, Jean1 aVestergård, Mette1 aVillenave, Cecile1 aWaeyenberge, Lieven1 aWilschut, Rutger1 aWright, Daniel, G.1 aKeith, Aidan, M.1 aYang, Jiue-in1 aSchmidt, Olaf1 aBouharroud, R.1 aFerji, Z.1 avan der Putten, Wim, H.1 aRouth, Devin1 aCrowther, Thomas, Ward uhttps://www.nature.com/articles/s41597-020-0437-302038nas a2200205 4500008004100000245010100041210006900142260001200211520136000223653001501583653001801598653002201616653001701638653001301655653002201668100002501690700001901715700001701734856008101751 2020 eng d00aShotgun metagenomics reveal a diverse assemblage of protists in a model Antarctic soil ecosystem0 aShotgun metagenomics reveal a diverse assemblage of protists in c08/20203 aThe soils of the McMurdo Dry Valleys (MDV) of Antarctica are established models for understanding fundamental processes in soil ecosystem functioning (e.g. ecological tipping points, community structuring, and nutrient cycling) because the extreme physical environment drastically reduces biodiversity and ecological complexity. Understanding the functioning of MDV soils requires in‐depth knowledge of the diversity of MDV soil species. Protists, which contribute significantly to soil ecosystem functioning worldwide, remain poorly characterized in the MDV. To better assess the diversity of MDV protists, we performed shotgun metagenomics on 18 sites representing a variety of landscape features and edaphic variables. Our results show MDV soil protists are diverse at both the genus (155 of 281 eukaryote genera) and family (120) levels, but comprise only 6% of eukaryotic reads. Protists are structured by moisture, total N, and distance from the local coast, and possess limited richness in arid (<5% moisture) and at high elevation sites, known drivers of communities in the MDV. High relative diversity and broad distribution of protists in our study promotes these organisms as key members of MDV soil microbiomes and the MDV as a useful system for understanding the contribution of soil protists to the structure of soil microbiomes.
10aAntarctica10aextremophiles10afunctional groups10ametagenomics10aprotozoa10asoil microbiology1 aThompson, Andrew, R.1 aGeisen, Stefan1 aAdams, Byron uhttps://sfamjournals.onlinelibrary.wiley.com/doi/abs/10.1111/1462-2920.1519802353nas a2200397 4500008004100000245012200041210006900163260001200232490000600244520115100250100002101401700002501422700002101447700002101468700001401489700002201503700001701525700002201542700001701564700002001581700002001601700002401621700002201645700001901667700002401686700002401710700001701734700002301751700002001774700001801794700002401812700002201836700002401858700001901882856005401901 2019 eng d00aBiotic interactions are an unexpected yet critical control on the complexity of an abiotically driven polar ecosystem0 aBiotic interactions are an unexpected yet critical control on th c02/20190 v23 aAbiotic and biotic factors control ecosystem biodiversity, but their relative contributions remain unclear. The ultraoligotrophic ecosystem of the Antarctic Dry Valleys, a simple yet highly heterogeneous ecosystem, is a natural laboratory well-suited for resolving the abiotic and biotic controls of community structure. We undertook a multidisciplinary investigation to capture ecologically relevant biotic and abiotic attributes of more than 500 sites in the Dry Valleys, encompassing observed landscape heterogeneities across more than 200 km2. Using richness of autotrophic and heterotrophic taxa as a proxy for functional complexity, we linked measured variables in a parsimonious yet comprehensive structural equation model that explained significant variations in biological complexity and identified landscape-scale and fine-scale abiotic factors as the primary drivers of diversity. However, the inclusion of linkages among functional groups was essential for constructing the best-fitting model. Our findings support the notion that biotic interactions make crucial contributions even in an extremely simple ecosystem.
1 aLee, Charles, K.1 aLaughlin, Daniel, C.1 aBottos, Eric, M.1 aCaruso, Tancredi1 aJoy, Kurt1 aBarrett, John, E.1 aBrabyn, Lars1 aNielsen, Uffe, N.1 aAdams, Byron1 aWall, Diana, H.1 aHopkins, D., W.1 aPointing, Steve, B.1 aMcDonald, Ian, R.1 aCowan, Don, A.1 aBanks, Jonathan, C.1 aStichbury, Glen, A.1 aJones, Irfon1 aZawar-Reza, Peyman1 aKaturji, Marwan1 aHogg, Ian, D.1 aSparrow, Ashley, D.1 aStorey, Bryan, C.1 aGreen, T., G. Allan1 aCary, Craig, S uhttps://www.nature.com/articles/s42003-018-0274-502639nas a2200301 4500008004100000245008400041210006900125260001200194520169800206653001501904653002101919653002401940653002701964653001301991100002102004700002602025700001702051700001602068700002502084700002502109700001702134700002202151700002302173700002002196700002402216700002402240856007302264 2019 eng d00aThe hydroecology of an ephemeral wetland in the McMurdo Dry Valleys, Antarctica0 ahydroecology of an ephemeral wetland in the McMurdo Dry Valleys c11/20193 aThe McMurdo Dry Valleys (MDV) is a polar desert on the coast of East Antarctica where ephemeral wetlands become hydrologically active during warm and sunny summers when sub‐surface flows are generated from melting snowfields. To understand the structure and function of polar wetland ecosystems, we investigated the hydroecology of one such wetland, the Wormherder Creek wetland, during the warm and sunny summer of 2008 – 2009, when the wetland was hydrologically reactivated. Conservative tracer (LiCl) was injected for a 2‐hour period into a stream above the wetland to determine flow path orientations and hydrologic residence times. Tracer results indicated that surface water is rapidly exchanged with wetland groundwater and wetland residence times may exceed two austral summers. Major ion concentrations were uniform in samples from surface water and shallow groundwater throughout the wetland. Microbial mats in the wetland had high autotrophic index values (the ratios of chlorophyll a [Chl‐a]/ash‐free dry mass [AFDM]), ranging from 9‐38 μg Chl‐a/mg AFDM, indicative of actively photosynthesizing mat communities. The diatom communities in the mats were relatively uniform compared to those in mats from regularly flowing MDV streams, with four endemic and one widespread diatom taxa of the genus Luticola accounting for an average of 86% of the community. These results indicate that the hydrologic characteristics of the wetland contribute to uniform geochemical conditions. In turn, uniform geochemical conditions may explain the high autotrophic index values of the microbial mats and relatively low spatial variation of the diatom community.
10aAntarctica10adesert hydrology10adiatom biodiversity10ahyporheic interactions10awetlands1 aWlostowski, Adam1 aSchulte, Nicholas, O.1 aAdams, Byron1 aBall, Becky1 aEsposito, Rhea, M.M.1 aGooseff, Michael, N.1 aLyons, Berry1 aNielsen, Uffe, N.1 aVirginia, Ross, A.1 aWall, Diana, H.1 aWelch, Kathleen, A.1 aMcKnight, Diane, M. uhttps://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2019JG00515301860nas a2200253 4500008004100000245011500041210006900156260001200225490000600237520106300243100002101306700001801327700002201345700002101367700002101388700002001409700001901429700002201448700002401470700002201494700002001516700001701536856005301553 2019 eng d00aNematodes in a polar desert reveal the relative role of biotic interactions in the coexistence of soil animals0 aNematodes in a polar desert reveal the relative role of biotic i c02/20190 v23 aAbiotic factors are major determinants of soil animal distributions and their dominant role is pronounced in extreme ecosystems, with biotic interactions seemingly playing a minor role. We modelled co-occurrence and distribution of the three nematode species that dominate the soil food web of the McMurdo Dry Valleys (Antarctica). Abiotic factors, other biotic groups, and autocorrelation all contributed to structuring nematode species distributions. However, after removing their effects, we found that the presence of the most abundant nematode species greatly, and negatively, affected the probability of detecting one of the other two species. We observed similar patterns in relative abundances for two out of three pairs of species. Harsh abiotic conditions alone are insufficient to explain contemporary nematode distributions whereas the role of negative biotic interactions has been largely underestimated in soil. The future challenge is to understand how the effects of global change on biotic interactions will alter species coexistence.
1 aCaruso, Tancredi1 aHogg, Ian, D.1 aNielsen, Uffe, N.1 aBottos, Eric, M.1 aLee, Charles, K.1 aHopkins, D., W.1 aCary, Craig, S1 aBarrett, John, E.1 aGreen, T., G. Allan1 aStorey, Bryan, C.1 aWall, Diana, H.1 aAdams, Byron uhttp://www.nature.com/articles/s42003-018-0260-y01897nas a2200133 4500008004100000245008000041210006900121260001200190520131700202100002501519700002301544700001701567856017901584 2019 eng d00aProvisional checklist of terrestrial heterotrophic protists from Antarctica0 aProvisional checklist of terrestrial heterotrophic protists from c11/20193 aHeterotrophic soil protists encompass lineages that are both evolutionarily ancient and highly diverse, providing an untapped wealth of scientific insight. Yet the diversity of free-living heterotrophic terrestrial protists is still largely unknown. To contribute to our understanding of this diversity, we present a checklist of heterotrophic protists currently reported from terrestrial Antarctica, for which no comprehensive evaluation currently exists. As a polar continent, Antarctica is especially susceptible to rising temperatures caused by anthropogenic climate change. Establishing a baseline for future conservation efforts of Antarctic protists is therefore important. We performed a literature search and found 236 taxa identified to species and an additional 303 taxa identified to higher taxonomic levels in 54 studies spanning over 100 years of research. Isolated by distance, climate and the circumpolar vortex, Antarctica is the most extreme continent on Earth: it is not unreasonable to think that it may host physiologically and evolutionarily unique species of protists, yet currently most species discovered in Antarctica are considered cosmopolitan. Additional sampling of the more extreme intra-continental zones will probably result in the discovery of more novel and unique taxa.
1 aThompson, Andrew, R.1 aPowell, Gareth, S.1 aAdams, Byron uhttps://www.cambridge.org/core/journals/antarctic-science/article/provisional-checklist-of-terrestrial-heterotrophic-protists-from-antarctica/DC08D89ABDC5AF2CC83E38B1C6F1F78C03892nas a2200949 4500008004100000245007900041210006900120260001200189490000800201520116600209100002601375700001901401700001701420700001901437700002501456700001401481700002501495700001701520700001701537700002601554700002601580700002301606700002701629700002301656700002101679700003101700700001801731700002101749700002001770700003001790700001501820700002001835700001901855700002501874700002301899700001901922700002101941700001701962700002201979700002102001700002602022700002302048700001102071700001702082700002202099700002102121700003102142700002402173700002202197700002202219700001802241700001702259700002502276700002202301700001902323700002702342700001602369700001802385700002202403700003202425700002302457700002302480700002002503700002202523700002002545700002702565700001802592700002102610700001902631700002302650700001502673700002202688700002302710700002202733700002402755700002002779700002102799700002302820700001802843700002702861856005402888 2019 eng d00aSoil nematode abundance and functional group composition at a global scale0 aSoil nematode abundance and functional group composition at a gl c08/20190 v5723 aSoil organisms are a crucial part of the terrestrial biosphere. Despite their importance for ecosystem functioning, few quantitative, spatially explicit models of the active belowground community currently exist. In particular, nematodes are the most abundant animals on Earth, filling all trophic levels in the soil food web. Here we use 6,759 georeferenced samples to generate a mechanistic understanding of the patterns of the global abundance of nematodes in the soil and the composition of their functional groups. The resulting maps show that 4.4 ± 0.64 × 1020 nematodes (with a total biomass of approximately 0.3 gigatonnes) inhabit surface soils across the world, with higher abundances in sub-Arctic regions (38% of total) than in temperate (24%) or tropical (21%) regions. Regional variations in these global trends also provide insights into local patterns of soil fertility and functioning. These high-resolution models provide the first steps towards representing soil ecological processes in global biogeochemical models and will enable the prediction of elemental cycling under current and future climate scenarios.
1 avan den Hoogen, Johan1 aGeisen, Stefan1 aRouth, Devin1 aFerris, Howard1 aTraunspurger, Walter1 aWardle, D1 ade Goede, Ron, G. M.1 aAdams, Byron1 aAhmad, Wasim1 aAndriuzzi, Walter, S.1 aBardgett, Richard, D.1 aBonkowski, Michael1 aCampos-Herrera, Raquel1 aCares, Juvenil, E.1 aCaruso, Tancredi1 aCaixeta, Larissa, de Brito1 aChen, Xiaoyun1 aCosta, Sofia, R.1 aCreamer, Rachel1 aCastro, José, Mauro da C1 aDam, Marie1 aDjigal, Djibril1 aEscuer, Miguel1 aGriffiths, Bryan, S.1 aGutiérrez, Carmen1 aHohberg, Karin1 aKalinkina, Daria1 aKardol, Paul1 aKergunteuil, Alan1 aKorthals, Gerard1 aKrashevska, Valentyna1 aKudrin, Alexey, A.1 aLi, Qi1 aLiang, Wenju1 aMagilton, Matthew1 aMarais, Mariette1 aMartín, José, Antonio Ro1 aMatveeva, Elizaveta1 aMayad, El, Hassan1 aMulder, Christian1 aMullin, Peter1 aNeilson, Roy1 aNguyen, T., A. Duong1 aNielsen, Uffe, N.1 aOkada, Hiroaki1 aRius, Juan, Emilio Pal1 aPan, Kaiwen1 aPeneva, Vlada1 aPellissier, Loïc1 ada Silva, Julio, Carlos Per1 aPitteloud, Camille1 aPowers, Thomas, O.1 aPowers, Kirsten1 aQuist, Casper, W.1 aRasmann, Sergio1 aMoreno, Sara, Sánchez1 aScheu, Stefan1 aSetälä, Heikki1 aSushchuk, Anna1 aTiunov, Alexei, V.1 aTrap, Jean1 avan der Putten, W1 aVestergård, Mette1 aVillenave, Cecile1 aWaeyenberge, Lieven1 aWall, Diana, H.1 aWilschut, Rutger1 aWright, Daniel, G.1 aYang, Jiue-in1 aCrowther, Thomas, Ward uhttps://www.nature.com/articles/s41586-019-1418-602534nas a2200229 4500008004100000245010900041210006900150260001200219300001600231490000800247520179600255100002102051700001702072700002402089700001502113700002302128700001902151700002402170700001902194700001702213856007402230 2018 eng d00aAeolian material transport and its role in landscape connectivity in the McMurdo Dry Valleys, Antarctica0 aAeolian material transport and its role in landscape connectivit c12/2018 a3323 - 33370 v1233 aArid regions, particularly polar and alpine desert environments, have diminished landscape connectivity compared to temperate regions due to limited and/or seasonal hydrological processes. For these environments, aeolian processes play a particularly important role in landscape evolution and biotic community vitality through nutrient and solute additions. The McMurdo Dry Valleys (MDV) are the largest ice-free area in Antarctica and are potentially a major source of aeolian material for the continent. From this region, samples were collected at five heights (~5, 10, 20, 50, and 100 cm) above the surface seasonally for 2013 through 2015 from Alatna Valley, Victoria Valley, Miers Valley, and Taylor Valley (Taylor Glacier, East Lake Bonney, F6 (Lake Fryxell), and Explorer’s Cove). Despite significant geological separation and varying glacial histories, low-elevation and coastal sites had similar major ion chemistries, as did high-elevation and inland locations. This locational clustering of compositions was also evident in scanning electron microscopy images and principal component analyses, particularly for samples collected at ~100 cm above the surface. Compared to published soil literature, aeolian material in Taylor Valley demonstrates a primarily down-valley transport of material toward the coast. Soluble N:P ratios in the aeolian material reflect relative nutrient enrichments seen in MDV soils and lakes, where younger, coastal soils are relatively N depleted, while older, up-valley soils are relatively P depleted. The aeolian transport of materials, including water-soluble nutrients, is an important vector of connectivity within the MDV and provides a mechanism to help “homogenize” the geochemistry of both soil and aquatic ecosystems.
1 aDiaz, Melisa, A.1 aAdams, Byron1 aWelch, Kathleen, A.1 aWelch, Sue1 aOpiyo, Stephen, O.1 aKhan, Alia, L.1 aMcKnight, Diane, M.1 aCary, Craig, S1 aLyons, Berry uhttps://agupubs.onlinelibrary.wiley.com/doi/full/10.1029/2017JF00458904018nas a2200217 4500008004100000245011800041210006900159260004000228490001000268520328000278653002403558653002703582653002103609653002703630653002003657653002403677653001803701100001303719700001703732856005103749 2018 eng d00aGenomics and transcriptomics of Antarctic nematodes reveal drivers of life history evolution and genome evolution0 aGenomics and transcriptomics of Antarctic nematodes reveal drive aProvo, UTbBrigham Young University0 vPh.D.3 aElemental stoichiometry defines a critical understanding of the relationship between nutrient availability and usage throughout different levels of the biological community. We found there is a link between available phosphorus (P), cellular phosphorus, and nematode development as postulated by the growth rate hypothesis (GRH). I predicted that in a P-poor environment, cellular RNA concentrations would be lower than they are in P-rich environment, and thus the 18srRNA expression level will have reduced. To most efficiently regulate the uptake of limited P, I predicted that nematodes in P-poor environments would decrease the number of copies of the 18s rRNA gene in their genome. I measured life history traits as well as rRNA gene expression and gene copy number. We found that elemental stoichiometry predicts evolutionary changes consistent with the Growth Rate Hypothesis. We sequenced and assembled a draft genome of P. murrayi. Although we expected to find genes responsible for stress tolerance, we hypothesized that in response to strong selection pressure associated with living in a simplified ecosystem, over time the genome of P. murrayi should have undergone significant decay (gene loss) relative to species in ecosystems structured more strongly by biotic interactions. We found significantly fewer genes in P. murrayi. To compare patterns of gene expression between two highly divergent Antarctic nematode species, we sequenced and assembled the transcriptomes of S. lindsayae and P. murrayi. Under laboratory conditions at 4 ̊C, S. lindsayae had significantly lower rates of gene expression but expressed a significantly larger number of genes. We speculate that the differences in gene expression are correlated with life history traits (developmental rates) while the differences in the number of genes expressed can be explained by their different genetic systems (S. lindsayae is amphimictic, P. murrayi is parthenogenic) and the soil environments to which they are adapted. Since we previously showed that differences in available P content can influence the evolution of gene expression via gene copy number, and that this ultimately influences growth rate, we wondered how much of this response is driven by genetics versus how strongly these patterns are driven by temperature. To better understand this, we maintained wild type populations of P. murrayi in P-rich and P-poor conditions at 5 ̊C, 10 ̊C and 15 ̊C in the laboratory for over 40 generations and sequenced the transcriptomes prepared from each treatment group. We found that nutrient levels played an important role in gene expression when the temperature is optimal for P. murrayi culturing and that temperature is more important in gene expression when the available P is limited. This work underscores the utility of using principles of elemental stoichiometry coupled with genomic and transcriptomics research tools to make and test predictions about life history evolution. The results of my work also inform inferences about the ways in which nutrient availability also drives the organization of trophic interactions and ultimately ecosystems.
10aAntarctic nematodes10aCaenorhabditis elegans10agenome evolution10agrowth rate hypothesis10aPlectus murrayi10aScottnema lindsayae10atranscriptome1 aXue, Xia1 aAdams, Byron uhttps://search.proquest.com/docview/208189900302670nas a2200181 4500008004100000245011700041210006900158260001200227300001400239490000700253520207300260100002602333700001702359700002202376700002302398700002002421856004702441 2018 eng d00aObserved trends of soil fauna in the Antarctic Dry Valleys: early signs of shifts predicted under climate change0 aObserved trends of soil fauna in the Antarctic Dry Valleys early c02/2018 a312 - 3210 v993 aLong-term observations of ecological communities are necessary for generating and testing predictions of ecosystem responses to climate change. We investigated temporal trends and spatial patterns of soil fauna along similar environmental gradients in three sites of the McMurdo Dry Valleys, Antarctica, spanning two distinct climatic phases: a decadal cool- ing trend from the early 1990s through the austral summer of February 2001, followed by a shift to the current trend of warming summers and more frequent discrete warming events. After February 2001, we observed a decline in the dominant species (the nematode Scottnema lindsayae) and increased abundance and expanded distribution of less common taxa (rotifers, tardigrades, and other nematode species). Such diverging responses have resulted in slightly greater evenness and spatial homogeneity of taxa. However, total abundance of soil fauna appears to be declining, as positive trends of the less common species so far have not compen- sated for the declining numbers of the dominant species. Interannual variation in the propor- tion of juveniles in the dominant species was consistent across sites, whereas trends in abundance varied more. Structural equation modeling supports the hypothesis that the observed biological trends arose from dissimilar responses by dominant and less common spe- cies to pulses of water availability resulting from enhanced ice melt. No direct effects of mean summer temperature were found, but there is evidence of indirect effects via its weak but signif- icant positive relationship with soil moisture. Our findings show that combining an under- standing of species responses to environmental change with long-term observations in the field can provide a context for validating and refining predictions of ecological trends in the abun- dance and diversity of soil fauna.
1 aAndriuzzi, Walter, S.1 aAdams, Byron1 aBarrett, John, E.1 aVirginia, Ross, A.1 aWall, Diana, H. uhttp://doi.wiley.com/10.1002/ecy.2090/full02340nas a2200181 4500008004100000022001300041245009000054210006900144260001200213490000800225520176100233100001601994700001702010700002202027700002002049700002302069856006602092 2018 eng d a0038071700aSoil biological responses to C, N and P fertilization in a polar desert of Antarctica0 aSoil biological responses to C N and P fertilization in a polar c07/20180 v1223 a
In the polar desert ecosystem of the McMurdo Dry Valleys of Antarctica, biology is constrained by available liquid water, low temperatures, as well as the availability of organic matter and nutrient elements. These soil ecosystems are climate-sensitive, where projected future warming may have profound effects on biological communities and biogeochemical cycling. Warmer temperatures will mobilize meltwater from permafrost and glaciers, may increase precipitation and may be accompanied by pulses of nutrient availability. Enhanced water and nutrient availability have the potential to greatly influence desert soil biology and ecosystem processes. The objectives of this 5-year study were to determine which nutrient elements (C, N, P) are most limiting to dry valley soil communities and whether landscape history (i.e., in situ soil type and stoichiometry) influences soil community response to nutrient additions. After 3 years of no noticeable response, soil CO2 flux was significantly higher under addition of C+ N than the other treatments, regardless of in situ soil stoichiometry, but microbial biomass and invertebrate abundance were variable and not influenced in the same manner. A stable isotope incubation suggests that fertilization increases C and N mineralization from organic matter via stimulating microbial activity, with loss of both the applied treatments as well in situ C and N. However, these responses are relatively short-lived, suggesting long-term impacts on C and N cycling would only occur if meltwater and nutrient pulses are sustained over time, a scenario that is increasingly likely for the dry valleys.
1 aBall, Becky1 aAdams, Byron1 aBarrett, John, E.1 aWall, Diana, H.1 aVirginia, Ross, A. uhttp://linkinghub.elsevier.com/retrieve/pii/S003807171830108102240nas a2200145 4500008004100000245010800041210006900149260001200218490000800230520171900238100002101957700002501978700001702003856007402020 2018 eng d00aSoil Moisture Controls the Thermal Habitat of Active Layer Soils in the McMurdo Dry Valleys, Antarctica0 aSoil Moisture Controls the Thermal Habitat of Active Layer Soils c01/20180 v1233 a
Antarctic soil ecosystems are strongly controlled by abiotic habitat variables. Regional climate change in the McMurdo Dry Valleys is expected to cause warming over the next century, leading to an increase in frequency of freeze-thaw cycling in the soil habitat. Previous studies show that physiological stress associated with freeze-thaw cycling adversely affects invertebrate populations by decreasing abundance and positively selecting for larger body sizes. However, it remains unclear whether or not climate warming will indeed enhance the frequency of annual freeze-thaw cycling and associated physiological stresses. This research quantifies the frequency, rate, and spatial heterogeneity of active layer freezing to better understand how regional climate change may affect active layer soil thermodynamics, and, in turn, affect soil macroinvertebrate communities. Shallow active layer temperature, specific conductance, and soil moisture were observed along natural wetness gradients. Field observations show that the frequency and rate of freeze events are nonlinearly related to freezable soil moisture (θf). Over a 2 year period, soils at θf < 0.080 m3/m3 experienced between 15 and 35 freeze events and froze rapidly compared to soils with θf > 0.080 m3/m3, which experienced between 2 and 6 freeze events and froze more gradually. A numerical soil thermodynamic model is able to simulate observed freezing rates across a range of θf, reinforcing a well-known causal relationship between soil moisture and active layer freezing dynamics. Findings show that slight increases in soil moisture can potentially offset the effect of climate warming on exacerbating soil freeze-thaw cycling.
1 aWlostowski, Adam1 aGooseff, Michael, N.1 aAdams, Byron uhttps://agupubs.onlinelibrary.wiley.com/doi/full/10.1002/2017JG00401802513nas a2200277 4500008004100000245010700041210006900148260001200217300001600229490000700245520169000252653001201942653001601954653001601970653001401986653001502000653001602015100002602031700002102057700002402078700001702102700001702119700002002136700002402156856005502180 2018 eng d00aSpatial and temporal patterns of microbial mats and associated invertebrates along an Antarctic stream0 aSpatial and temporal patterns of microbial mats and associated i c10/2018 a1911–19210 v413 a
Microbial biofilms are biological hotspots in many alpine and polar ecosystems, but the controls on and functional significance of their fauna are little known. We studied cyanobacterial mats and the underlying sediment in a glacial meltwater stream in the McMurdo Dry Valleys, Antarctica. We investigated mat biomass (total and phototrophic), diatoms, and micro-meiofauna (nematodes, rotifers, and tardigrades) at nine sites along a 1670 m stream reach in a cold, low-flow growing season, and in a warmer growing season in which peak flows (above 100 L s−1) scoured the mats. Diatom and invertebrate communities were not related, but mat biomass in the low-flow year was negatively related to nematode abundance, including that of the omnivore Eudorylaimus. In the high-flow year that followed, invertebrate abundance was reduced in the mats, diatom community structure was altered, and mat biomass was higher. The difference in invertebrate abundance between years was greater in mats in upstream reaches, where the greatest increases in flow velocity may have occurred, and was negligible in mats in downstream reaches as well as in the sediment beneath the mats. Integrating our results with previous findings, we generate two predictive hypotheses to be tested in glacial meltwater streams: (1) under peak flows invertebrates decline in the microbial mats, while (2) the sediment beneath the mats is a refuge from the flow disturbance. Our results also suggest that, under stable flow conditions, microinvertebrate grazers could exert top-down control on microbial mat biomass.
10adiatoms10aDisturbance10aDry valleys10aEpilithon10aMicrofauna10aStream flow1 aAndriuzzi, Walter, S.1 aStanish, Lee, F.1 aSimmons, Breana, L.1 aJaros, Chris1 aAdams, Byron1 aWall, Diana, H.1 aMcKnight, Diane, M. uhttp://link.springer.com/10.1007/s00300-018-2331-402332nas a2200193 4500008004100000245017900041210006900220260001200289300001600301490000700317520164300324100001701967700001701984700002202001700001702023700002302040700002002063856005502083 2018 eng d00aStable C and N isotope ratios reveal soil food web structure and identify the nematode Eudorylaimus antarcticus as an omnivore–predator in Taylor Valley, Antarctica0 aStable C and N isotope ratios reveal soil food web structure and c05/2018 a1013–10180 v413 a
Soil food webs of the McMurdo Dry Valleys, Antarctica are simple. These include primary trophic levels of mosses, algae, cyanobacteria, bacteria, archaea, and fungi, and their protozoan and metazoan consumers (including relatively few species of nematodes, tardigrades, rotifers, and microarthropods). These biota are patchily distributed across the landscape, with greatest faunal biodiversity associated with wet soil. Understanding trophic structure is critical to studies of biotic interactions and distribution; yet, McMurdo Dry Valley soil food web structure has been inferred from limited laboratory culturing and micro- scopic observations. To address this, we measured stable isotope natural abundance ratios of C (13C/12C) and N (15N/14N) for di erent metazoan taxa (using whole body biomass) to determine soil food web structure in Taylor Valley, Antarctica. Nitrogen isotopes were most useful in di erentiating trophic levels because they fractionated predictably at higher trophic levels. Using 15N/14N, we found that three trophic levels were present in wet soil habitats. While cyanobacterial mats were the primary trophic level, the nematode Plectus murrayi, tardigrade Acutuncus antarcticus, and rotifers composed a secondary trophic level of grazers. Eudorylaimus antarcticus had a 15N/14N ratio that was 2–4‰ higher than that of grazers, indicating that this species is the sole member of a tertiary trophic level. Understanding the trophic positions of soil fauna is critical to predictions of current and future species interactions and their distributions for the McMurdo Dry Valleys, Antarctica.
1 aShaw, Ashley1 aAdams, Byron1 aBarrett, John, E.1 aLyons, Berry1 aVirginia, Ross, A.1 aWall, Diana, H. uhttp://link.springer.com/10.1007/s00300-017-2243-802975nas a2200289 4500008004100000245013500041210006900176260001200245490000600257520199400263653002902257653002302286653002402309653003102333653002602364653002602390100002602416700002402442700001602466700002002482700002202502700002602524700002502550700002302575700001702598856007002615 2018 eng d00aStoichiometric Shifts in Soil C:N:P Promote Bacterial Taxa Dominance, Maintain Biodiversity, and Deconstruct Community Assemblages0 aStoichiometric Shifts in Soil CNP Promote Bacterial Taxa Dominan c07/20180 v93 aImbalances in C:N:P supply ratios may cause bacterial resource limitations and constrain biogeochemical processes, but the importance of shifts in soil stoichiometry are complicated by the nearly limitless interactions between an immensely rich species pool and a multiple chemical resource forms. To more clearly identify the impact of soil C:N:P on bacteria, we evaluated the cumulative effects of single and coupled long-term nutrient additions (i.e., C as mannitol, N as equal concentrations NH4 + and NO3 − , and P as Na3PO4) and water on communities in an Antarctic polar desert, Taylor Valley. Untreated soils possessed relatively low bacterial diversity, simplified organic C sources due to the absence of plants, limited inorganic N, and excess soil P potentially attenuating links between C:N:P. After 6 years of adding resources, an alleviation of C and N colimitation allowed one rare Micrococcaceae, an Arthrobacter species, to dominate, comprising 47% of the total community abundance and elevating soil respiration by 136% relative to untreated soils. The addition of N alone reduced C:N ratios, elevated bacterial richness and diversity, and allowed rare taxa relying on ammonium and nitrite for metabolism to become more abundant [e.g., nitrite oxidizing Nitrospira species (Nitrosomonadaceae), denitrifiers utilizing nitrite (Gemmatimonadaceae) and members of Rhodobacteraceae with a high affinity for ammonium]. Based on community co-occurrence networks, lower C:P ratios in soils following P and CP additions created more diffuse and less connected communities by disrupting 73% of species interactions and selecting for taxa potentially exploiting abundant P. Unlike amended nutrients, water additions alone elicited no lasting impact on communities. Our results suggest that as soils become nutrient rich a wide array of outcomes are possible from species dominance and the deconstruction of species interconnectedness to the maintenance of biodiversity.
10aecological stoichiometry10aLake Fryxell Basin10aMcMurdo Dry Valleys10anetwork community modeling10anutrient colimitation10aSolirubrobacteriaceae1 aAanderud, Zachary, T.1 aSaurey, Sabrina, D.1 aBall, Becky1 aWall, Diana, H.1 aBarrett, John, E.1 aMuscarella, Mario, E.1 aGriffin, Natasha, A.1 aVirginia, Ross, A.1 aAdams, Byron uhttps://www.frontiersin.org/article/10.3389/fmicb.2018.01401/full00851nas a2200265 4500008004100000245009100041210006900132260001200201300001400213490000600227100002500233700002200258700001700280700002100297700002400318700001700342700002400359700002100383700002000404700003300424700003100457700002300488700002000511856005400531 2017 eng d00aDecadal ecosystem response to an anomalous melt season in a polar desert in Antarctica0 aDecadal ecosystem response to an anomalous melt season in a pola c09/2017 a1334-13380 v11 aGooseff, Michael, N.1 aBarrett, John, E.1 aAdams, Byron1 aDoran, Peter, T.1 aFountain, Andrew, G1 aLyons, Berry1 aMcKnight, Diane, M.1 aPriscu, John, C.1 aSokol, Eric, R.1 aTakacs-Vesbach, Cristina, D.1 aVandegehuchte, Martijn, L.1 aVirginia, Ross, A.1 aWall, Diana, H. uhttps://www.nature.com/articles/s41559-017-0253-001830nas a2200193 4500008004100000245014200041210006900183260001200252300001400264490000700278520115100285100001801436700002601454700002401480700003301504700001701537700002001554856006201574 2017 eng d00aDecoupled responses of soil bacteria and their invertebrate consumer to warming, but not freeze-thaw cycles, in the Antarctic Dry Valleys0 aDecoupled responses of soil bacteria and their invertebrate cons c10/2017 a1242-12490 v203 aAltered temperature profiles resulting in increased warming and freeze–thaw cycle (FTC) frequency pose great ecological challenges to organisms in alpine and polar ecosystems. We performed a laboratory microcosm experiment to investigate how temperature variability affects soil bacterial cell numbers, and abundance and traits of soil microfauna (the microbivorous nematode Scottnema lindsayae) from McMurdo Dry Valleys, Antarctica. FTCs and constant freezing shifted nematode body size distribution towards large individuals, driven by higher mortality among smaller individuals. FTCs reduced both bacterial and nematode abundance, but bacterial cell numbers also declined under warming, demonstrating decoupled consumer–prey responses. We predict that higher occurrence of FTCs in cold ecosystems will select for large body size within soil microinvertebrates and overall reduce their abundance. In contrast, warm temperatures without FTCs could lead to divergent responses in soil bacteria and their microinvertebrate consumers, potentially affecting energy and nutrient transfer rates in soil food webs of cold ecosystems.
1 aKnox, Matthew1 aAndriuzzi, Walter, S.1 aBuelow, Heather, N.1 aTakacs-Vesbach, Cristina, D.1 aAdams, Byron1 aWall, Diana, H. uhttp://onlinelibrary.wiley.com/doi/10.1111/ele.12819/full01407nas a2200445 4500008004100000245007700041210006900118260001200187490005900199100002200258700002400280700001900304700002100323700002100344700001900365700002400384700002000408700001700428700002400445700001700469700002300486700001900509700002100528700002000549700002100569700002200590700002300612700002500635700001800660700002200678700002300700700002300723700002500746700001800771700002000789700002400809700002600833700002500859856007700884 2016 eng d00aAerobiology Over Antarctica – A New Initiative for Atmospheric Ecology0 aAerobiology Over Antarctica A New Initiative for Atmospheric Eco c02/20160 v7767961946103149272350113651344451428464791101239365741 aPearce, David, A.1 aAlekhina, Irina, A.1 aTerauds, Aleks1 aWilmotte, Annick1 aQuesada, Antonio1 aEdwards, Arwyn1 aDommergue, Aurelien1 aSattler, Birgit1 aAdams, Byron1 aMagalhaes, Catarina1 aChu, Wan-Loy1 aLau, Maggie, C. Y.1 aCary, Craig, S1 aSmith, David, J.1 aWall, Diana, H.1 aEguren, Gabriela1 aMatcher, Gwynneth1 aBradley, James, A.1 ade Vera, Jean-Pierre1 aElster, Josef1 aHughes, Kevin, A.1 aCuthbertson, Lewis1 aBenning, Liane, G.1 aGunde-Cimerman, Nina1 aConvey, Peter1 aHong, Soon, Gyu1 aPointing, Steve, B.1 aPellizari, Vivian, H.1 aVincent, Warwick, F. uhttp://journal.frontiersin.org/Article/10.3389/fmicb.2016.00016/abstract00694nas a2200205 4500008004100000022001400041245012500055210006900180260001600249300001400265490000700279100002000286700001800306700002300324700001900347700002000366700001700386700002300403856006200426 2016 eng d a0831-279600aGenetic diversity among populations of Antarctic springtails (Collembola) within the Mackay Glacier ecotone 10 aGenetic diversity among populations of Antarctic springtails Col cJan-09-2016 a762 - 7700 v591 aBeet, Clare, R.1 aHogg, Ian, D.1 aCollins, Gemma, E.1 aCowan, Don, A.1 aWall, Diana, H.1 aAdams, Byron1 aWilson, John-James uhttp://www.nrcresearchpress.com/doi/10.1139/gen-2015-019400691nas a2200157 4500008004100000245015400041210006900195260001600264300001400280490000800294100002400302700001800326700001700344700002400361856014800385 2016 eng d00aHigh levels of intraspecific genetic divergences revealed for Antarctic springtails: evidence for small-scale isolation during Pleistocene glaciation0 aHigh levels of intraspecific genetic divergences revealed for An cJan-09-2016 a166 - 1780 v1191 aBennett, Kristi, R.1 aHogg, Ian, D.1 aAdams, Byron1 aHebert, Paul, D. N. uhttps://academic.oup.com/biolinnean/article-lookup/doi/10.1111/bij.12796https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fbij.1279601797nas a2200253 4500008004100000022001400041245007900055210006900134260001200203300001400215490000700229520101000236100002401246700001601270700001701286700002101303700002001324700002501344700002201369700002101391700002801412700002301440856008001463 2016 eng d a0006-356800aThe Impact of a Large-Scale Climate Event on Antarctic Ecosystem Processes0 aImpact of a LargeScale Climate Event on Antarctic Ecosystem Proc c10/2016 a848 - 8630 v663 aExtreme climate and weather events, such as a drought, hurricanes, or ice storms, can strongly imprint ecosystem processing and may alter ecosystem structure. Ecosystems in extreme environments are particularly vulnerable because of their adaptation to severe limitations in energy, water, or nutrients. The vulnerability can be expressed as a relatively long-lasting ecosystem response to a small or brief change in environmental conditions. Such an event occurred in Antarctica and affected two vastly different ecosystems: a marine-dominated coastal system and a terrestrial polar desert. Both sites experienced winds that warmed air temperatures above the 0°C threshold, resulting in extensive snow and ice melt and triggering a series of cascading effects through the ecosystems that are continuing to play out more than a decade later. This highlights the sensitivity of Antarctic ecosystems to warming events, which should occur more frequently in the future with global climate warming.
1 aFountain, Andrew, G1 aSaba, Grace1 aAdams, Byron1 aDoran, Peter, T.1 aFraser, William1 aGooseff, Michael, N.1 aObryk, Maciek, K.1 aPriscu, John, C.1 aStammerjohn, Sharon, E.1 aVirginia, Ross, A. uhttp://academic.oup.com/bioscience/article-pdf/66/10/848/7510601/biw110.pdf00658nas a2200193 4500008004100000022001400041245011300055210007100168260001200239300001400251490000700265100001800272700002000290700002300310700003100333700001900364700001700383856006400400 2016 eng d a0722-406000aImpact of diurnal freeze–thaw cycles on the soil nematode Scottnema lindsayae in Taylor Valley, Antarctica0 aImpact of diurnal freeze–thaw cycles on the soil nematode Scottn c04/2016 a583 - 5920 v391 aKnox, Matthew1 aWall, Diana, H.1 aVirginia, Ross, A.1 aVandegehuchte, Martijn, L.1 aSan Gil, Inigo1 aAdams, Byron uhttps://link.springer.com/article/10.1007/s00300-015-1809-600801nas a2200253 4500008004100000022001400041245008400055210006900139260001200208300000800220490000700228100003400235700002400269700002200293700002600315700002500341700002400366700001700390700002200407700002300429700002600452700002200478856004700500 2015 eng d a1445-522600aMitochondrial DNA analyses reveal widespread tardigrade diversity in Antarctica0 aMitochondrial DNA analyses reveal widespread tardigrade diversit c12/2015 a5780 v291 aVelasco-Castrillon, Alejandro1 aMcInnes, Sandra, J.1 aSchultz, Mark, B.1 aArroniz-Crespo, Maria1 aD'Haese, Cyrille, A.1 aGibson, John, A. E.1 aAdams, Byron1 aPage, Timothy, J.1 aAustin, Andrew, D.1 aCooper, Steven, J. B.1 aStevens, Mark, I. uhttp://www.publish.csiro.au/?paper=IS1401900571nas a2200181 4500008004100000022001400041245008700055210006900142260001200211300001200223490000800235100001700243700002000260700002300280700001600303700001800319856005200337 2014 eng d a1313-298900aEcological Biogeography of the Terrestrial Nematodes of Victoria Land, Antarctica0 aEcological Biogeography of the Terrestrial Nematodes of Victoria c06/2015 a29 - 710 v4191 aAdams, Byron1 aWall, Diana, H.1 aVirginia, Ross, A.1 aBroos, Emma1 aKnox, Matthew uhttp://zookeys.pensoft.net/articles.php?id=389902237nas a2200337 4500008004100000024003300041245010300074210006900177260001200246300001300258490000700271520126700278100001301545700001701558700001901575700001401594700002001608700001801628700001801646700001301664700001701677700001401694700002001708700001801728700001401746700002101760700001801781700002001799700001701819856006301836 2013 eng d ahdl: 10013 / epic.42531.d00100aAntarctic Thresholds - Ecosystem Resilience and Adaptation (AnT-ERA), a new SCAR-biology programme0 aAntarctic Thresholds Ecosystem Resilience and Adaptation AnTERA c10/2013 a147-150.0 v823 aStresses on Antarctic ecosystems result from environmental change, including extreme events, and from (other) human impacts. Consequently, Antarctic habitats are changing, some at a rapid pace while others are relatively stable. A cascade of responses from molecular through organismic to the community level are expected. The differences in biological complexity and evolutionary histories between both polar regions and the rest of the planet suggest that stresses on polar ecosystem function may have fundamentally different outcomes from those at lower latitudes. Polar ecosystem processes are therefore key to informing wider ecological debate about the nature of stability and potential changes across the biosphere. The main goal of AnT-ERA is to facilitate the science required to examine changes in biological processes in Antarctic and sub-Antarctic marine-, freshwater and terrestrial ecosystems. Tolerance limits, as well as thresholds, resistance and resilience to environmental change will be determined. AnT-ERA is classified into three overlapping themes, which represent three levels of biological organisation: (1) molecular and physiological performance, (2) population processes and species traits, (3) ecosystem function and services.
1 aGutt, J.1 aAdams, Byron1 aBracegirdle, T1 aCowan, D.1 aCummings, Vonda1 adi Prisco, G.1 aGradinger, R.1 aIsla, E.1 aMcIntyre, T.1 aMurphy, E1 aPeck, Lloyd, S.1 aSchloss, I.R.1 aSmith, C.1 aSuckling, C., C.1 aTakahashi, A.1 aWall, Diana, H.1 aXavier, J.C. uhttp://epic.awi.de/34238/1/Polarforschung_82-2_147-150.pdf00533nas a2200157 4500008004100000245009000041210006900131260001300200300001000213490000700223100002500230700001700255700002600272700002000298856005700318 2013 eng d00aThe Life Cycle of the Antarctic Nematode Plectus murrayi Under Laboratory Conditions.0 aLife Cycle of the Antarctic Nematode Plectus murrayi Under Labor c2013 Mar a39-420 v451 aTomasel, Cecilia, M.1 aAdams, Byron1 aTomasel, Fernando, G.1 aWall, Diana, H. uhttp://www.ncbi.nlm.nih.gov/pmc/articles/PMC3625130/00488nas a2200145 4500008004100000245007700041210006900118260001200187300001200199490000700211100002100218700001700239700001700256856006900273 2013 eng d00aUnderstanding Terrestrial Ecosystem Response to Antarctic Climate Change0 aUnderstanding Terrestrial Ecosystem Response to Antarctic Climat c01/2013 a33 - 330 v941 aLevy, Joseph, S.1 aLyons, Berry1 aAdams, Byron uhttp://onlinelibrary.wiley.com/doi/10.1002/2013EO030009/abstract00753nas a2200193 4500008004100000245014000041210006900181260001200250300000800262490000700270100002100277700002300298700001700321700002500338700002400363700002400387700002200411856012600433 2012 eng d00aAntarctic Tardigrada: a first step in understanding molecular operational taxonomic units (MOTUs) and biogeography of cryptic meiofauna0 aAntarctic Tardigrada a first step in understanding molecular ope c12/2012 a5260 v261 aCzechowski, Paul1 aSands, Chester, J.1 aAdams, Byron1 aD'Haese, Cyrille, A.1 aGibson, John, A. E.1 aMcInnes, Sandra, J.1 aStevens, Mark, I. uhttps://mcm.lternet.edu/content/antarctic-tardigrada-first-step-understanding-molecular-operational-taxonomic-units-motus00683nas a2200205 4500008004100000245009900041210006900140260001200209100001700221700002300238700001700261700002200278700002100300700002600321700001700347700002200364700002000386700002200406856004900428 2012 eng d00aCross-biome metagenomic analyses of soil microbial communities and their functional attributes0 aCrossbiome metagenomic analyses of soil microbial communities an c11/20121 aFierer, Noah1 aLeff, Jonathan, W.1 aAdams, Byron1 aNielsen, Uffe, N.1 aBates, Scott, T.1 aLauber, Christian, L.1 aOwens, Sarah1 aGilbert, Jack, A.1 aWall, Diana, H.1 aCaporaso, Gregory uwww.pnas.org/cgi/doi/10.1073/pnas.121521011000640nas a2200193 4500008004100000245010100041210006900142260001200211300001000223490000600233100002200239700002000261700001700281700002300298700001600321700002500337700002400362856006000386 2012 eng d00aThe ecology of pulse events: insights from an extreme climatic event in a polar desert ecosystem0 aecology of pulse events insights from an extreme climatic event c02/2012 aart170 v31 aNielsen, Uffe, N.1 aWall, Diana, H.1 aAdams, Byron1 aVirginia, Ross, A.1 aBall, Becky1 aGooseff, Michael, N.1 aMcKnight, Diane, M. uhttp://www.esajournals.org/doi/abs/10.1890/ES11-00325.100626nas a2200181 4500008004100000245012300041210006900164260001100233300001200244490000700256100001600263700002000279700001200299700001700311700002200328700002300350856007100373 2012 eng d00aThawing permafrost alters nematode populations and soil habitat characteristics in an Antarctic polar desert ecosystem0 aThawing permafrost alters nematode populations and soil habitat c3/2012 a75 - 810 v551 aSmith, T.E.1 aWall, Diana, H.1 aHogg, I1 aAdams, Byron1 aNielsen, Uffe, N.1 aVirginia, Ross, A. uhttp://www.sciencedirect.com/science/article/pii/S003140561100115600530nas a2200157 4500008004100000245008700041210006900128260001200197300001600209490000700225100002200232700002000254700001700274700002300291856005800314 2011 eng d00aAntarctic nematode communities: observed and predicted responses to climate change0 aAntarctic nematode communities observed and predicted responses c11/2011 a1701 - 17110 v341 aNielsen, Uffe, N.1 aWall, Diana, H.1 aAdams, Byron1 aVirginia, Ross, A. uhttp://www.springerlink.com/content/v588t5671p1w1323/00518nas a2200133 4500008004100000020001800041245007000059210006900129260003600198300001200234100002500246700001700271856009600288 2011 eng d a978184593687700aMolecular analysis of desiccation survival in Antarctic nematodes0 aMolecular analysis of desiccation survival in Antarctic nematode aWallingfordbCABI International a205-2321 aAdhikari, Bishwo, N.1 aAdams, Byron uhttps://mcm.lternet.edu/content/molecular-analysis-desiccation-survival-antarctic-nematodes00627nam a2200145 4500008004100000245012700041210006900168260002200237300001400259100002500273700001700298700001800315700002000333856012800353 2011 eng d00aMolecular and physiological basis of nematode survival: Molecular analyses of desiccation survival in Antarctic nematodes.0 aMolecular and physiological basis of nematode survival Molecular aWallingfordbCABI a205 - 2321 aAdhikari, Bishwo, N.1 aAdams, Byron1 aPerry, R., N.1 aWharton, D., A. uhttps://mcm.lternet.edu/content/molecular-and-physiological-basis-nematode-survival-molecular-analyses-desiccation-survival00632nas a2200181 4500008004100000245008400041210006900125260001100194300001400205490000700219100002200226700002000248700001400268700001700282700001700299700002300316856011100339 2011 eng d00aNematode communities of Byers Peninsula, Livingston Island, maritime Antarctica0 aNematode communities of Byers Peninsula Livingston Island mariti c8/2011 a349 - 3570 v231 aNielsen, Uffe, N.1 aWall, Diana, H.1 aLi, Grace1 aToro, Manuel1 aAdams, Byron1 aVirginia, Ross, A. uhttps://mcm.lternet.edu/content/nematode-communities-byers-peninsula-livingston-island-maritime-antarctica00639nas a2200169 4500008004100000245009600041210006900137260001200206300002800218490000900246100002500255700002500280700001000305700002000315700001700335856011700352 2010 eng d00aThe Antarctic Nematode Plectus murrayi: An Emerging Model to Study Multiple Stress Survival0 aAntarctic Nematode Plectus murrayi An Emerging Model to Study Mu c11/2010 apdb.emo142 - pdb.emo1420 v20101 aAdhikari, Bishwo, N.1 aTomasel, Cecilia, M.1 aLi, G1 aWall, Diana, H.1 aAdams, Byron uhttps://mcm.lternet.edu/content/antarctic-nematode-plectus-murrayi-emerging-model-study-multiple-stress-survival00534nas a2200169 4500008004100000245005300041210005300094260001200147300003200159490000900191100002500200700002500225700001000250700002000260700001700280856006700297 2010 eng d00aCulturing the Antarctic Nematode Plectus murrayi0 aCulturing the Antarctic Nematode Plectus murrayi c11/2010 apdb.prot5522 - pdb.prot55220 v20101 aAdhikari, Bishwo, N.1 aTomasel, Cecilia, M.1 aLi, G1 aWall, Diana, H.1 aAdams, Byron uhttp://cshprotocols.cshlp.org/content/2010/11/pdb.emo142.short00587nas a2200145 4500008004100000245011100041210006900152260001200221300001600233490000800249100002500257700002000282700001700302856012200319 2010 eng d00aEffect of slow desiccation and freezing on gene transcription and stress survival of an Antarctic nematode0 aEffect of slow desiccation and freezing on gene transcription an c06/2010 a1803 - 18120 v2131 aAdhikari, Bishwo, N.1 aWall, Diana, H.1 aAdams, Byron uhttps://mcm.lternet.edu/content/effect-slow-desiccation-and-freezing-gene-transcription-and-stress-survival-antarctic00756nas a2200205 4500008004100000245011700041210006900158260001100227300001400238490000700252100001800259700002200277700002000299700001700319700002200336700002400358700002300382700002400405856012100429 2010 eng d00aExperimentally increased snow accumulation alters soil moisture and animal community structure in a polar desert0 aExperimentally increased snow accumulation alters soil moisture c7/2010 a897 - 9070 v331 aAyres, Edward1 aNkem, Johnson, N.1 aWall, Diana, H.1 aAdams, Byron1 aBarrett, John, E.1 aSimmons, Breana, L.1 aVirginia, Ross, A.1 aFountain, Andrew, G uhttps://mcm.lternet.edu/content/experimentally-increased-snow-accumulation-alters-soil-moisture-and-animal-community03656nas a2200337 4500008004100000245005700041210005600098260004900154490001000203520257600213653001802789653002302807653003202830653003002862653001602892653002402908653003402932653002402966653002402990653002003014653005103034653002403085653001803109653002003127653003003147653002403177653003003201100002503231700001703256856004503273 2010 eng d00aGenomic analysis of nematode-environment interaction0 aGenomic analysis of nematodeenvironment interaction aProvo, UTbBrigham Young Universityc08/20100 vPh.D.3 aThe natural environments of organisms present a multitude of biotic and abiotic challenges that require both short-term ecological and long-term evolutionary responses. Though most environmental response studies have focused on effects at the ecosystem, community and organismal levels, the ultimate controls of these responses are located in the genome of the organism. Soil nematodes are highly responsive to, and display a wide variety of responses to changing environmental conditions, making them ideal models for the study of organismal interactions with their environment. In an attempt to examine responses to environmental stress (desiccation and freezing), genomic level analyses of gene expression during anhydrobiosis of the Antarctic nematode Plectus murrayi was undertaken. An EST library representative of the desiccation induced transcripts was established and the transcripts differentially expressed during desiccation stress were identified. The expressed genome of P. murrayi showed that desiccation survival in nematodes involves differential expression of a suite of genes from diverse functional areas, and constitutive expression of a number of stress related genes. My study also revealed that exposure to slow desiccation and freezing plays an important role in the transcription of stress related genes, improves desiccation and freezing survival of nematodes. Deterioration of traits essential for biological control has been recognized in diverse biological control agents including insect pathogenic nematodes. I studied the genetic mechanisms behind such deterioration using expression profiling. My results showed that trait deterioration of insect pathogenic nematode induces substantial overall changes in the nematode transcriptome and exhibits a general pattern of metabolic shift causing massive changes in metabolic and other processes. Finally, through field observations and molecular laboratory experiments the validity of the growth rate hypothesis in natural populations of Antarctic nematodes was tested. My results indicated that elemental stoichiometry influences evolutionary adaptations in gene expression and genome evolution. My study, in addition to providing immediate insight into the mechanisms by which multicellular animals respond to their environment, is transformative in its potential to inform other fundamental ecological and evolutionary questions, such as the evolution of life-history patterns and the relationship between community structure and ecological function in ecosystems.
10aanhydrobiosis10aAntarctic nematode10acomparative transcriptomics10acomplementary DNA library10adesiccation10afunctional analysis10aHeterorhabditis bacteriophora10aMcMurdo Dry Valleys10amicroarray analysis10aPlectus murrayi10aquantative real-time polymerase chain reaction10aScottnema lindsayae10astoichiometry10astress survival10asubtractive hybridization10atrait deterioration10atranscriptional profiling1 aAdhikari, Bishwo, N.1 aAdams, Byron uhttps://scholarsarchive.byu.edu/etd/257800672nas a2200157 4500008004100000245016900041210006900210260001200279300001400291490000700305100002700312700001200339700002400351700001700375856012200392 2010 eng d00aLatitudinal distribution and mitochondrial DNA (COI) variability of Stereotydeus spp. (Acari: Prostigmata) in Victoria Land and the central Transantarctic Mountains0 aLatitudinal distribution and mitochondrial DNA COI variability o c12/2010 a749 - 7560 v221 aDemetras, Nicholas, J.1 aHogg, I1 aBanks, Jonathan, C.1 aAdams, Byron uhttps://mcm.lternet.edu/content/latitudinal-distribution-and-mitochondrial-dna-coi-variability-stereotydeus-spp-acari00495nas a2200145 4500008004100000245010200041210006900143260001200212300000700224490000700231100002500238700002000263700001700283856004900300 2009 eng d00aDesiccation survival in an Antarctic nematode: molecular analysis using expressed sequenced tags.0 aDesiccation survival in an Antarctic nematode molecular analysis c09/2009 a690 v101 aAdhikari, Bishwo, N.1 aWall, Diana, H.1 aAdams, Byron uhttp://www.biomedcentral.com/1471-2164/10/6900675nas a2200193 4500008004100000245008100041210006900122260001200191300000700203490000600210100002400216700002700240700002400267700002000291700001700311700002200328700002200350856010900372 2009 eng d00aEnvironmental DNA sequencing primers for eutardigrades and bdelloid rotifers0 aEnvironmental DNA sequencing primers for eutardigrades and bdell c11/2009 a250 v91 aRobeson, Michael, S1 aCostello, Elizabeth, K1 aFreeman, Kristen, R1 aWhiting, Jeremy1 aAdams, Byron1 aMartin, Andrew, P1 aSchmidt, Steve, K uhttps://mcm.lternet.edu/content/environmental-dna-sequencing-primers-eutardigrades-and-bdelloid-rotifers00654nas a2200169 4500008004100000245010800041210006900149300001400218490000700232100002400239700002000263700001700283700001800300700002200318700002300340856012100363 2009 eng d00aLong-term experimental warming reduces soil nematode populations in the McMurdo Dry Valleys, Antarctica0 aLongterm experimental warming reduces soil nematode populations a2052-20600 v411 aSimmons, Breana, L.1 aWall, Diana, H.1 aAdams, Byron1 aAyres, Edward1 aBarrett, John, E.1 aVirginia, Ross, A. uhttps://mcm.lternet.edu/content/long-term-experimental-warming-reduces-soil-nematode-populations-mcmurdo-dry-valleys00629nas a2200169 4500008004100000245008900041210006900130300001400199490000700213100002400220700002000244700001700264700001800281700002200299700002300321856011500344 2009 eng d00aTerrestrial mesofauna in above- and below-ground habitats: Taylor Valley, Antarctica0 aTerrestrial mesofauna in above and belowground habitats Taylor V a1549-15580 v321 aSimmons, Breana, L.1 aWall, Diana, H.1 aAdams, Byron1 aAyres, Edward1 aBarrett, John, E.1 aVirginia, Ross, A. uhttps://mcm.lternet.edu/content/terrestrial-mesofauna-above-and-below-ground-habitats-taylor-valley-antarctica00440nas a2200145 4500008004100000245004600041210004400087260001200131300001400143490000800157100002300165700002000188700001700208856006900225 2009 eng d00aWhere's the ecology in molecular ecology?0 aWheres the ecology in molecular ecology c05/2009 a1601-16090 v1181 aJohnson, Jerry, B.1 aPeat, Scott, M.1 aAdams, Byron uhttps://mcm.lternet.edu/content/wheres-ecology-molecular-ecology00606nas a2200145 4500008004100000245011900041210006900160300001400229490000700243100002200250700002300272700002000295700001700315856012800332 2008 eng d00aDecline in a dominant invertebrate species contributes to altered carbon cycling in a low-diversity soil ecosystem0 aDecline in a dominant invertebrate species contributes to altere a1734-17440 v141 aBarrett, John, E.1 aVirginia, Ross, A.1 aWall, Diana, H.1 aAdams, Byron uhttps://mcm.lternet.edu/content/decline-dominant-invertebrate-species-contributes-altered-carbon-cycling-low-diversity-soil02709nas a2200241 4500008004100000245010000041210006900141260001200210300001400222490000700236520190500243100001802148700002202166700002002188700001702208700002202225700001302247700002402260700002202284700002402306700002302330856011402353 2008 eng d00aEffects of Human Trampling on Populations of Soil Fauna in the McMurdo Dry Valleys, Antarctica.0 aEffects of Human Trampling on Populations of Soil Fauna in the M c12/2008 a1544-15510 v223 aAntarctic ecosystems are often considered nearly pristine because levels of anthropogenic disturbance are extremely low there. Nevertheless, over recent decades there has been a rapid increase in the number of people, researchers and tourists, visiting Antarctica. We evaluated, over 10 years, the direct impact of foot traffic on the abundance of soil animals and soil properties in Taylor Valley within the McMurdo Dry Valleys region of Antarctica. We compared soils from minimally disturbed areas with soils from nearby paths that received intermediate and high levels of human foot traffic (i.e., up to approximately 80 passes per year). The nematodes Scottnema lindsayae and Eudorylaimus sp. were the most commonly found animal species, whereas rotifers and tardigrades were found only occasionally. On the highly trampled footpaths, abundance of S. lindsayae and Eudorylaimus sp. was up to 52 and 76% lower, respectively, than in untrampled areas. Moreover, reduction in S. lindsayae abundance was more pronounced after 10 years than 2 years and in the surface soil than in the deeper soil, presumably because of the longer period of disturbance and the greater level of physical disturbance experienced by the surface soil. The ratio of living to dead Eudorylaimus sp. also declined with increased trampling intensity, which is indicative of increased mortality or reduced fecundity. At one site there was evidence that high levels of trampling reduced soil CO2 fluxes, which is related to total biological activity in the soil. Our results show that even low levels of human traffic can significantly affect soil biota in this ecosystem and may alter ecosystem processes, such as carbon cycling. Consequently, management and conservation plans for Antarctic soils should consider the high sensitivity of soil fauna to physical disturbance as human presence in this ecosystem increases.
1 aAyres, Edward1 aNkem, Johnson, N.1 aWall, Diana, H.1 aAdams, Byron1 aBarrett, John, E.1 aBroos, E1 aParsons, Andrew, N.1 aPowers, Laura, E.1 aSimmons, Breana, L.1 aVirginia, Ross, A. uhttps://mcm.lternet.edu/content/effects-human-trampling-populations-soil-fauna-mcmurdo-dry-valleys-antarctica00625nas a2200169 4500008004100000245010600041210006900147300001200216490000700228100001700235700002000252700001300272700001500285700001500300700001200315856012800327 2007 eng d00aThe southernmost worm, Scottnema lindsayae (Nematoda): diversity, dispersal and ecological stability.0 asouthernmost worm Scottnema lindsayae Nematoda diversity dispers a809-8150 v301 aAdams, Byron1 aWall, Diana, H.1 aGozel, U1 aDillman, A1 aChaston, J1 aHogg, I uhttps://mcm.lternet.edu/content/southernmost-worm-scottnema-lindsayae-nematoda-diversity-dispersal-and-ecological-stability00578nas a2200133 4500008004100000245011000041210006900151100001800220700002000238700001700258700002200275700002300297856012400320 2007 eng d00aUnique similarity of faunal communities across aquatic terrestrial interfaces in a polar desert ecosystem0 aUnique similarity of faunal communities across aquatic terrestri1 aAyres, Edward1 aWall, Diana, H.1 aAdams, Byron1 aBarrett, John, E.1 aVirginia, Ross, A. uhttps://mcm.lternet.edu/content/unique-similarity-faunal-communities-across-aquatic-terrestrial-interfaces-polar-desert00665nas a2200217 4500008004100000245008000041210006900121300001400190490000700204100001200211700002000223700001900243700001400262700001500276700001600291700001700307700001600324700002100340700001500361856007100376 2006 eng d00aBiotic interactions in Antarctic terrestrial ecosystems: Are they a factor?0 aBiotic interactions in Antarctic terrestrial ecosystems Are they a3035-30400 v381 aHogg, I1 aWall, Diana, H.1 aCary, Craig, S1 aConvey, K1 aNewsham, K1 aODonnell, G1 aAdams, Byron1 aAislabie, J1 aFrati, Francesco1 aStevens, M uhttp://www.sciencedirect.com/science/article/pii/S003807170600217300757nas a2200181 4500008004100000245010900041210006900150300001200219490000700231100002200238700002300260700002000283700001900303700001700322700001400339700001600353856020600369 2006 eng d00aCo-variation in soil biodiversity and biogeochemistry in Northern and Southern Victoria Land, Antarctica0 aCovariation in soil biodiversity and biogeochemistry in Northern a535-5480 v181 aBarrett, John, E.1 aVirginia, Ross, A.1 aWall, Diana, H.1 aCary, Craig, S1 aAdams, Byron1 aHacker, A1 aAislabie, J uhttps://www.cambridge.org/core/journals/antarctic-science/article/covariation-in-soil-biodiversity-and-biogeochemistry-in-northern-and-southern-victoria-land-antarctica/C3514C28DB75F3A19DB5F266D4B1B56E00891nas a2200325 4500008004100000245005400041210005400095300001400149490000700163100001700170700001500187700001800202700001200220700002100232700001200253700001500265700001700280700001500297700001500312700001500327700002600342700001800368700002000386700001600406700001600422700001600438700001900454700001600473856007600489 2006 eng d00aDiversity and distribution of Victoria Land biota0 aDiversity and distribution of Victoria Land biota a3003-30180 v381 aAdams, Byron1 aConnell, L1 aConvey, Peter1 aFell, J1 aFrati, Francesco1 aHogg, I1 aNewsham, K1 aO'Donnell, A1 aRussell, N1 aSeppelt, R1 aStevens, M1 aBardgett, Richard, D.1 aAyres, Edward1 aWall, Diana, H.1 aAislabie, J1 aBamforth, S1 aBargagli, R1 aCary, Craig, S1 aCavacini, P uhttps://www.sciencedirect.com/science/article/abs/pii/S003807170600221500563nas a2200145 4500008004100000245009200041210006900133300001400202490000700216100002000223700001700243700002200260700002000282856011500302 2006 eng d00aA synthesis of soil biodiversity and ecosystem functioning in Victoria Land, Antarctica0 asynthesis of soil biodiversity and ecosystem functioning in Vict a3001-30020 v381 aWall, Diana, H.1 aAdams, Byron1 aBarrett, John, E.1 aHopkins, D., W. uhttps://mcm.lternet.edu/content/synthesis-soil-biodiversity-and-ecosystem-functioning-victoria-land-antarctica02560nas a2200205 4500008004100000245008000041210006900121300001200190490000700202520193000209653001102139100002202150700002002172700002302192700002202215700001302237700001802250700001702268856006902285 2006 eng d00aWind dispersal of soil invertebrates in the McMurdo Dry Valleys, Antarctica0 aWind dispersal of soil invertebrates in the McMurdo Dry Valleys a346-3520 v293 aDispersal of soil organisms is crucial for their spatial distribution and adaptation to the prevailing conditions of the Antarctic Dry Valleys. This study investigated the possibility of wind dispersal of soil invertebrates within the dry valleys. Soil invertebrates were evaluated in (1) pockets of transported sediments to lake ice and glacier surfaces, (2) wind-transported dust particles in collection pans (Bundt pans) 100 cm above the soil surface, and (3) sediments transported closer to the surface (<50 cm) and collected in open top chambers (OTCs). Invertebrates were extracted and identified. Nematodes were identified to species and classified according to life stage and sex. Three species of nematodes were recovered and Scottnema lindsayae was the most dominant. There were more juveniles (∼71%) in the transported sediments than adults (29%). Tardigrades and rotifers were more abundant in sediments on lake and glacier surfaces while nematodes were more abundant in the dry sediment collections of Bundt pans and OTCs. The abundance of immobile (dead) nematodes in the Bundt pans and OTCs was three times greater than active (live) nematodes. Anhydrobiosis constitutes a survival mechanism that allows wind dispersal of nematodes in the McMurdo Dry Valleys. Our results show that soil invertebrates are dispersed by wind in the Dry Valleys and are viable in ice communities on lake surfaces and glaciers.
10aBiggie1 aNkem, Johnson, N.1 aWall, Diana, H.1 aVirginia, Ross, A.1 aBarrett, John, E.1 aBroos, E1 aPorazinska, D1 aAdams, Byron uhttp://link.springer.com/content/pdf/10.1007%2Fs00300-005-0061-x